Books & papers

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Books

bulletZuur, A.F., Ieno, E.N. and Smith, G.M. (2007). Analysing Ecological Data. Springer. 700p. Series: Statistics for Biology and Health.

               - SUPPORT WEBSITE FOR:  Analysing Ecological Data

bulletZuur, A.F., Ieno, E.N., Walker, N. and Smith, G.M. (In prep). Analysing Ecological data using GLMM and GAMM in R. Springer.
bulletZuur, A.F., Ieno, E.N. and Meesters, E. (In prep). An introduction to R for life scientists. Springer.
bulletZuur, A.F., Ieno, E.N., Mazziotti, C., Montanari, G.,  Attilio, R, and Ferrari C.R. Common trends in trophic index time series from the coastal waters in Emilia-Romagna (Adriatic Sea-Italy). In: Chandler, R.E. and Scott,M. (eds). Statistical methods for trend detection and analysis in the Environmental Sciences. (In prep). John-Wiley.

Papers

bulletStrandings of sperm whales (Physeter macrocephalus) on north sea coasts are associated with positive temperature anomalies. Pierce, G.J., Santos, M.B., Smeenk, C., Saveliev, A. and Zuur, A.F. (2007-In press). Fisheries Research.
bulletV. Lahaye, P. Bustamante, R.J. Law, J.A. Learmonth, M.B. Santos, J.P. Boon, E. Rogan, W. Dabin, M.J. Addink, A. López, A.F. Zuur, G.J. Pierce, F. Caurant. (2007-In press). Biological and ecological factors related to trace element levels in harbour porpoises (Phocoena phocoena) from European waters. Marine Environmental Research. 
bullet Mendes, Sónia; Newton, Jason; Reid, Robert; Zuur, Alain; Pierce, Graham. (2007, In press). Teeth reveal sperm whale ontogenetic movements and trophic ecology through the profiling of stable isotopes of carbon and nitrogen. Oecologia.
bulletE.J.V. Gillibrand, A.J. Jamieson, P.M. Bagley, A.F. Zuur & I.G. Priede. (2007, In press). Seasonal development of a deep pelagic bioluminescent layer in the northeast Atlantic Ocean. Marine Ecology Progress Series.
bulletLaine, A.O, Andersin,A.B, Leiniö, S. & Zuur, A.F. (2007-In press). Stratification induced hypoxia as a structuring factor of macrozoobenthos in the open Gulf of Finland (Baltic Sea). Journal of Sea Research.
bulletBorges, L., Zuur, A.F., Rogan, E. and Officer, R. (2006). Modelling discards from demersal fisheries. ICES J. Mar. Sci. 63: 1086-1095.
bulletIeno, E.N., Solan, M., Batty, P. & Pierce, G.J., 2006. Distinguishing between the effects of infaunal species richness, identity and density in the marine benthos. Marine Ecology Progress Series 311: 263-271.
bulletNeat, F.C., Wright, P.J., Zuur, A.F., Gibb, I.M., Gibb, F.M., Tulett,D., Righton, D.A. and Turner,R.J. (2006). Residency and depth movements of a coastal group of Atlantic cod (Gadus morhua L). Marine Biology 148: 643-654.
bulletMacLeod, C.D. and Zuur, A.F. (2005). Habitat utilization by Blainville's beaked whales off Great Abaco, northern Bahamas, in relation to seabed topography. Marine Biology 147: 1-11.
bulletSacau, M., Pierce, G,J., Wang, J., Arkhipkin, A.I., Portela, J., Brickle, P., Santos, M.B., Zuur, A.F. and Cardoso, X. (2005). The spatio-temporal pattern of Argentine shortfin squid Illex argentinus abundance in the southwest Atlantic. Aquat. Living Resour. 18: 361-372.
bulletWeijerman M., Lindeboom H., Zuur A.F. (2005). Regime shifts in marine ecosystems in the North Sea and Wadden Sea. Marine Ecology Progress Series 298: 21-39.
bulletChen, C.S., Pierce, G.J., Wang, J., Robin, J.-P., Poulard, J.C., Pereira, J., Zuur, A.F., Boyle, P.R., Bailey, N., Beare, D.J., Jereb, P., Ragonese, S., Mannini, A. & Orsi-Relini, L., (2006). The apparent disappearance of Loligo forbesi from the south of its range in the 1990s: trends in Loligo spp. abundance in the northeast Atlantic and possible environmental influences. Fisheries Research 78: 44-54.
bulletPierce, G.J., Zuur, A.F., Smith, J.M., Santos, M.B., Bailey, N., Chen, C.-S. & Boyle, P.R., (2005). Interannual variation in life-cycle characteristics of the veined squid (Loligo forbesi) in Scottish (UK) waters. Aquatic Living Resources 18: 327-340.
bulletSmith, J.M., Pierce, G.J., Zuur, A.F. & Boyle, P.R. (2005). Seasonal patterns of investment in reproductive and somatic tissues in the squid Loligo forbesi. Aquatic Living Resources 18: 341-351.
bulletBorges, L., Zuur, A.F., Rogan, E. and Officer, R. (2005). Choosing the best sampling unit and auxiliary variable for discard estimations. Fish. Res. 75: Issue 1-3, 29-39.
bulletZuur A.F. and Pierce G.J. (2004). Common trends in Northeast Atlantic Squid time series. Journal of Sea Research 52: 57-72.
bulletBorges, L., Zuur, A.F., Rogan, E. and Officer, R. (2004). Optimum sampling levels in discard sampling programs. Can. J. Fish. Aquat. Sci. 61: 1918-1928.
bulletIeno, E., D. Alemany, D. Blanco & R. Bastida (2004). Prey size selection by Red Knot feeding on mud snails at Punta Rasa (Argentina) during migration. Waterbirds 27: 493-498.
bulletZuur, A.F., Fryer, R.J., Jolliffe, I.T., Dekker, R. and Beukema, J.J. (2003). Estimating common trends in multivariate time series using dynamic factor analysis. Environmetrics, 14(7): 665-685.
bulletFryer, J., Zuur, A.F. and Graham, N. (2003). Using mixed models to combine smooth size-selection and catch-comparison curves over hauls. Can. J. Fish. Aquat. Sci. 60: 448-459.
bulletZuur, A.F., Tuck, I.D. and Bailey, N. (2003). Dynamic factor analysis to estimate common trends in fisheries time series. Canadian Journal of Fisheries and Aquatic Sciences, 60: 542-552.
bulletIeno, E.N., J.P. Martin & R. Bastida (2000). Estimation of size classes in Laeonereis acuta (Polychaeta Nereididae) based on jaw length and body width usable in trophic studies. Bulletin of Marine Science 67(1): 30-44.
bulletBrinkman, A.G., C.J.M. Philippart & A.F. Zuur (1995). Model methods of mesocosm experimental methods. Helgoländer Meeresunters 49: 771-784.
bulletIeno, E.N. and R. Bastida. (1998). Spatial and temporal patterns in coastal macrobenthos of Samborombón Bay, Argentine: a case study of very low diversity. Estuaries 21: (4): 690-699.
bulletvan Geer, F.C. and Zuur, A.F. (1997). An extension of Box-Jenkins transfer/noise models for spatial interpolation of groundwater head series. Journal of Hydrology 192: 65-80.
bulletElias, R. & E.N. Ieno. (1993). The community of Laeonereis acuta Treadwell, 1923 (Polychaeta: Nereididae) in the estuary of Bahía Blanca, Argentina. Iheringia, Ser. Zool., Porto Alegre 75: 3-13.

Submitted papers

bulletScottish lobster fisheries and environmental variability. Lizarraga-Cubedo, H, Tuck, I, Bailey, N, Pierce, GJ, Zuur AF and Bova D. 
bulletPopulation Trends of Endangered Hawaiian Waterbirds Following Protection Under the U.S. Endangered Species Act. J. Michael Reed, Chris S. Elphick, A. F. Zuur, and E. N. Ieno. Conservation Biology.
bulletSpatial and temporal distribution of Lepeophtheirus salmonis (Krøyer) larvae in a sea loch containing Atlantic salmon, Salmo salar (L.), farms on the north-west coast of Scotland. MJ Penston, CP Millar, AF Zuur, and IM Davies. Journal of Fish Diseases